The current version of GALAXY (https:\/\/usegalaxy.org\/) will run into error when using ldaps authentication mechanics. The error is
\nTraceback (most recent call last):
\nFile “\/home\/galaxy\/galaxy-dist\/lib\/galaxy\/auth\/providers\/ldap_ad.py”, line 117, in authenticate
\nldap.set_option(_opt)
\nFile “\/home\/galaxy\/galaxy-dist\/.venv\/local\/lib\/python2.7\/site-packages\/ldap\/functions.py”, line 135, in set_option
\nreturn _ldap_function_call(None,_ldap.set_option,option,invalue)
\nFile “\/home\/galaxy\/galaxy-dist\/.venv\/local\/lib\/python2.7\/site-packages\/ldap\/functions.py”, line 66, in _ldap_function_call
\nresult = func(_args,**kwargs)
\nValueError: option error
\nThe function in Python LDAP binary _ldap.so func(_args,**kwargs) does not take the option argument “OPT_X_TLS_REQUIRE_CERT” properly.
\nThe CentOS 7 system version of python-ldap binary has the same issue.<\/p>\n
To overcome this, you will need to download the python-ldap source from
\nwget https:\/\/pypi.python.org\/packages\/67\/d9\/fa0ea70d1792875745116ad62ac8d4bcb07550b15cded591bb57df6a6d9a\/python-ldap-2.4.32.tar.gz#md5=7c46c8a04acc227a778c7900c87cdfc7
\nthen install certain devel package using
\nyum install openldap-devel
\nthen build the source by running
\npython setup.py build
\nAfterward, you do not need to replace the entire ldap directory, but only overwrite the _ldap.so file in your galaxy\/.venv\/lib\/python2.7\/site-packages\/ by the file from your build in .\/build\/lib.linux-x86_64-2.7\/ folder.
\nThen the ldaps will work.<\/p>\n","protected":false},"excerpt":{"rendered":"
The current version of GALAXY (https:\/\/usegalaxy.org\/) will run into error when using ldaps authentication mechanics. The error is Traceback (most recent call last): File “\/home\/galaxy\/galaxy-dist\/lib\/galaxy\/auth\/providers\/ldap_ad.py”, line 117, in authenticate ldap.set_option(_opt) File “\/home\/galaxy\/galaxy-dist\/.venv\/local\/lib\/python2.7\/site-packages\/ldap\/functions.py”, line 135, in set_option return _ldap_function_call(None,_ldap.set_option,option,invalue) File “\/home\/galaxy\/galaxy-dist\/.venv\/local\/lib\/python2.7\/site-packages\/ldap\/functions.py”, line 66, in _ldap_function_call result = func(_args,**kwargs) ValueError: option error The function in Python LDAP […]<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-590","post","type-post","status-publish","format-standard","hentry","category-uncategorized","post-blog"],"_links":{"self":[{"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/posts\/590","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=590"}],"version-history":[{"count":1,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/posts\/590\/revisions"}],"predecessor-version":[{"id":591,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=\/wp\/v2\/posts\/590\/revisions\/591"}],"wp:attachment":[{"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=590"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=590"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/csic.som.emory.edu\/~lzhou\/blogs\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=590"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}